Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.6□□□□□ -0.71
Cks1bP61025 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cks1bP61025 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Cks1bP61025 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.59□□□□□ -0.71
Cks1bP61025 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cks1bP61025 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.59□□□□□ -0.71
Cks1bP61025 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cks1bP61025 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.59□□□□□ -0.71
Cks1bP61025 Gm10052-201ENSMUST00000168019 960 ntBASIC10.59□□□□□ -0.71
Cks1bP61025 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cks1bP61025 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.59□□□□□ -0.71
Cks1bP61025 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.59□□□□□ -0.71
Cks1bP61025 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Gm7729-201ENSMUST00000050143 801 ntBASIC10.59□□□□□ -0.71
Cks1bP61025 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cks1bP61025 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cks1bP61025 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.58□□□□□ -0.72
Cks1bP61025 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.58□□□□□ -0.72
Cks1bP61025 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.58□□□□□ -0.72
Cks1bP61025 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.58□□□□□ -0.72
Cks1bP61025 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Mir1668-201ENSMUST00000184114 107 ntBASIC10.58□□□□□ -0.72
Cks1bP61025 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.58□□□□□ -0.72
Cks1bP61025 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.58□□□□□ -0.72
Cks1bP61025 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cks1bP61025 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cks1bP61025 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms