Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lim2P56563 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lim2P56563 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Lim2P56563 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lim2P56563 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.78□□□□□ -0.04
Lim2P56563 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.78□□□□□ -0.04
Lim2P56563 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.78□□□□□ -0.04
Lim2P56563 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.78□□□□□ -0.04
Lim2P56563 Gm43575-201ENSMUST00000196420 516 ntBASIC14.78□□□□□ -0.04
Lim2P56563 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.78□□□□□ -0.04
Lim2P56563 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lim2P56563 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lim2P56563 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Lim2P56563 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lim2P56563 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Lim2P56563 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Lim2P56563 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lim2P56563 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Lim2P56563 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Lim2P56563 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.77□□□□□ -0.05
Lim2P56563 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.77□□□□□ -0.05
Lim2P56563 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Gm11025-201ENSMUST00000140773 466 ntBASIC14.77□□□□□ -0.05
Lim2P56563 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Lim2P56563 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.77□□□□□ -0.05
Lim2P56563 Gm20553-201ENSMUST00000204205 844 ntBASIC14.77□□□□□ -0.05
Lim2P56563 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.77□□□□□ -0.05
Lim2P56563 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.77□□□□□ -0.05
Lim2P56563 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.77□□□□□ -0.05
Lim2P56563 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Lim2P56563 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.77□□□□□ -0.05
Lim2P56563 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lim2P56563 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.76□□□□□ -0.05
Lim2P56563 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lim2P56563 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.76□□□□□ -0.05
Lim2P56563 Gm16026-204ENSMUST00000162652 683 ntBASIC14.76□□□□□ -0.05
Lim2P56563 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.76□□□□□ -0.05
Lim2P56563 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lim2P56563 Gm45612-201ENSMUST00000211320 160 ntBASIC14.76□□□□□ -0.05
Lim2P56563 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.76□□□□□ -0.05
Lim2P56563 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.76□□□□□ -0.05
Lim2P56563 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.76□□□□□ -0.05
Lim2P56563 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lim2P56563 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms