Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.56■□□□□ 0.4
Irf5P56477 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.56■□□□□ 0.4
Irf5P56477 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.56■□□□□ 0.4
Irf5P56477 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.56■□□□□ 0.4
Irf5P56477 Gm18057-201ENSMUST00000208220 503 ntBASIC17.56■□□□□ 0.4
Irf5P56477 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.56■□□□□ 0.4
Irf5P56477 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.56■□□□□ 0.4
Irf5P56477 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf5P56477 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf5P56477 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf5P56477 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Irf5P56477 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Irf5P56477 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf5P56477 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.56■□□□□ 0.4
Irf5P56477 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Irf5P56477 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Irf5P56477 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.56■□□□□ 0.4
Irf5P56477 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Irf5P56477 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.55■□□□□ 0.4
Irf5P56477 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.55■□□□□ 0.4
Irf5P56477 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.55■□□□□ 0.4
Irf5P56477 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Mir6977-201ENSMUST00000184960 64 ntBASIC17.55■□□□□ 0.4
Irf5P56477 Gm10253-201ENSMUST00000194270 940 ntBASIC17.55■□□□□ 0.4
Irf5P56477 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.55■□□□□ 0.4
Irf5P56477 Gm7774-201ENSMUST00000200064 533 ntBASIC17.55■□□□□ 0.4
Irf5P56477 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.55■□□□□ 0.4
Irf5P56477 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.55■□□□□ 0.4
Irf5P56477 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Irf5P56477 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.55■□□□□ 0.4
Irf5P56477 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Irf5P56477 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf5P56477 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Irf5P56477 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Irf5P56477 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.54■□□□□ 0.4
Irf5P56477 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.54■□□□□ 0.4
Irf5P56477 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.54■□□□□ 0.4
Irf5P56477 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Irf5P56477 Gm12428-201ENSMUST00000119844 727 ntBASIC17.54■□□□□ 0.4
Irf5P56477 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.54■□□□□ 0.4
Irf5P56477 Gm18737-201ENSMUST00000173594 937 ntBASIC17.54■□□□□ 0.4
Irf5P56477 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Irf5P56477 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf5P56477 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.53■□□□□ 0.4
Irf5P56477 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.53■□□□□ 0.4
Irf5P56477 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.53■□□□□ 0.4
Irf5P56477 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.53■□□□□ 0.4
Irf5P56477 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.53■□□□□ 0.4
Irf5P56477 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.53■□□□□ 0.4
Irf5P56477 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.53■□□□□ 0.4
Irf5P56477 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Irf5P56477 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms