Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox3P53784 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.19□□□□□ -0.14
Sox3P53784 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.19□□□□□ -0.14
Sox3P53784 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox3P53784 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox3P53784 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Sox3P53784 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox3P53784 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox3P53784 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox3P53784 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox3P53784 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Gm15358-201ENSMUST00000119249 520 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.18□□□□□ -0.14
Sox3P53784 Gm18489-201ENSMUST00000172565 551 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox3P53784 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.18□□□□□ -0.14
Sox3P53784 Gm10253-201ENSMUST00000194270 940 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox3P53784 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Sox3P53784 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.18□□□□□ -0.14
Sox3P53784 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sox3P53784 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox3P53784 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox3P53784 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox3P53784 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.17□□□□□ -0.14
Sox3P53784 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.17□□□□□ -0.14
Sox3P53784 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox3P53784 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox3P53784 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox3P53784 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms