Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.63□□□□□ -0.07
Pdx1P52946 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.63□□□□□ -0.07
Pdx1P52946 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pdx1P52946 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.63□□□□□ -0.07
Pdx1P52946 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pdx1P52946 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.62□□□□□ -0.07
Pdx1P52946 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.62□□□□□ -0.07
Pdx1P52946 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pdx1P52946 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pdx1P52946 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.62□□□□□ -0.07
Pdx1P52946 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Pdx1P52946 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Pdx1P52946 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Pdx1P52946 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.61□□□□□ -0.07
Pdx1P52946 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pdx1P52946 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.61□□□□□ -0.07
Pdx1P52946 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.61□□□□□ -0.07
Pdx1P52946 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.61□□□□□ -0.07
Pdx1P52946 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.61□□□□□ -0.07
Pdx1P52946 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pdx1P52946 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.61□□□□□ -0.07
Pdx1P52946 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pdx1P52946 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pdx1P52946 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Pdx1P52946 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdx1P52946 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms