Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.61□□□□□ -0.39
Srp9P49962 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Gm28033-201ENSMUST00000184224 96 ntBASIC12.61□□□□□ -0.39
Srp9P49962 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.61□□□□□ -0.39
Srp9P49962 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.61□□□□□ -0.39
Srp9P49962 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.61□□□□□ -0.39
Srp9P49962 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Srp9P49962 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Srp9P49962 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Srp9P49962 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp9P49962 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.6□□□□□ -0.39
Srp9P49962 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.6□□□□□ -0.39
Srp9P49962 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Srp9P49962 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Srp9P49962 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Srp9P49962 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.6□□□□□ -0.39
Srp9P49962 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Srp9P49962 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp9P49962 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Gm14722-201ENSMUST00000118943 689 ntBASIC12.59□□□□□ -0.39
Srp9P49962 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Srp9P49962 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.59□□□□□ -0.39
Srp9P49962 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp9P49962 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Srp9P49962 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms