Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.56■□□□□ 0.4
Ercc3P49135 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.56■□□□□ 0.4
Ercc3P49135 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ercc3P49135 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.56■□□□□ 0.4
Ercc3P49135 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc3P49135 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Ercc3P49135 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ercc3P49135 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ercc3P49135 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
Ercc3P49135 Gm2272-201ENSMUST00000194903 582 ntBASIC17.55■□□□□ 0.4
Ercc3P49135 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.55■□□□□ 0.4
Ercc3P49135 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ercc3P49135 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc3P49135 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Carlr-201ENSMUST00000181515 2574 ntBASIC17.54■□□□□ 0.4
Ercc3P49135 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ercc3P49135 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ercc3P49135 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ercc3P49135 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Gm13365-201ENSMUST00000121188 973 ntBASIC17.54■□□□□ 0.4
Ercc3P49135 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.54■□□□□ 0.4
Ercc3P49135 Gm11025-201ENSMUST00000140773 466 ntBASIC17.54■□□□□ 0.4
Ercc3P49135 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.54■□□□□ 0.4
Ercc3P49135 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.54■□□□□ 0.4
Ercc3P49135 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.54■□□□□ 0.4
Ercc3P49135 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.54■□□□□ 0.4
Ercc3P49135 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Ercc3P49135 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc3P49135 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Gm16026-204ENSMUST00000162652 683 ntBASIC17.53■□□□□ 0.4
Ercc3P49135 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.53■□□□□ 0.4
Ercc3P49135 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.53■□□□□ 0.4
Ercc3P49135 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.53■□□□□ 0.4
Ercc3P49135 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.53■□□□□ 0.4
Ercc3P49135 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc3P49135 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.53■□□□□ 0.4
Ercc3P49135 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ercc3P49135 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms