Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.01□□□□□ -0.01
Vps4bP46467 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps4bP46467 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15□□□□□ -0.01
Vps4bP46467 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps4bP46467 Gm12008-201ENSMUST00000117791 755 ntBASIC15□□□□□ -0.01
Vps4bP46467 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Gm8000-201ENSMUST00000188378 592 ntBASIC15□□□□□ -0.01
Vps4bP46467 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15□□□□□ -0.01
Vps4bP46467 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15□□□□□ -0.01
Vps4bP46467 AC147366.1-201ENSMUST00000227671 852 ntBASIC15□□□□□ -0.01
Vps4bP46467 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps4bP46467 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15□□□□□ -0.01
Vps4bP46467 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps4bP46467 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15□□□□□ -0.01
Vps4bP46467 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps4bP46467 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps4bP46467 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Vps4bP46467 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.99□□□□□ -0.01
Vps4bP46467 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Vps4bP46467 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Vps4bP46467 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Gm7862-201ENSMUST00000121461 292 ntBASIC14.99□□□□□ -0.01
Vps4bP46467 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.99□□□□□ -0.01
Vps4bP46467 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps4bP46467 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Vps4bP46467 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Vps4bP46467 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps4bP46467 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps4bP46467 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps4bP46467 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps4bP46467 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps4bP46467 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps4bP46467 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Vps4bP46467 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.98□□□□□ -0.01
Vps4bP46467 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps4bP46467 Gm45167-201ENSMUST00000208007 322 ntBASIC14.98□□□□□ -0.01
Vps4bP46467 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Vps4bP46467 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps4bP46467 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.98□□□□□ -0.01
Vps4bP46467 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps4bP46467 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms