Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.54□□□□□ -0.4
Hist1h1dP43277 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm11780-201ENSMUST00000136880 516 ntBASIC12.53□□□□□ -0.4
Hist1h1dP43277 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.53□□□□□ -0.4
Hist1h1dP43277 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hist1h1dP43277 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.52□□□□□ -0.4
Hist1h1dP43277 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hist1h1dP43277 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.52□□□□□ -0.41
Hist1h1dP43277 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.52□□□□□ -0.41
Hist1h1dP43277 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.52□□□□□ -0.41
Hist1h1dP43277 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.52□□□□□ -0.41
Hist1h1dP43277 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.52□□□□□ -0.41
Hist1h1dP43277 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hist1h1dP43277 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist1h1dP43277 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hist1h1dP43277 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms