Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdx2P43241 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Cdx2P43241 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14□□□□□ -0.17
Cdx2P43241 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdx2P43241 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx2P43241 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdx2P43241 Gm5049-201ENSMUST00000195878 1590 ntBASIC14□□□□□ -0.17
Cdx2P43241 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx2P43241 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cdx2P43241 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cdx2P43241 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx2P43241 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Cdx2P43241 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cdx2P43241 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.99□□□□□ -0.17
Cdx2P43241 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.99□□□□□ -0.17
Cdx2P43241 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdx2P43241 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdx2P43241 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.99□□□□□ -0.17
Cdx2P43241 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.99□□□□□ -0.17
Cdx2P43241 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdx2P43241 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cdx2P43241 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Gm45668-201ENSMUST00000211271 493 ntBASIC13.99□□□□□ -0.17
Cdx2P43241 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.99□□□□□ -0.17
Cdx2P43241 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdx2P43241 Gm15823-201ENSMUST00000064305 670 ntBASIC13.99□□□□□ -0.17
Cdx2P43241 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cdx2P43241 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdx2P43241 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx2P43241 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdx2P43241 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.98□□□□□ -0.17
Cdx2P43241 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.98□□□□□ -0.17
Cdx2P43241 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Gm37917-201ENSMUST00000194711 392 ntBASIC13.98□□□□□ -0.17
Cdx2P43241 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdx2P43241 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx2P43241 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdx2P43241 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx2P43241 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx2P43241 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx2P43241 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdx2P43241 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdx2P43241 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx2P43241 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdx2P43241 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdx2P43241 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx2P43241 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.97□□□□□ -0.17
Cdx2P43241 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdx2P43241 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdx2P43241 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.97□□□□□ -0.17
Cdx2P43241 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
Cdx2P43241 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx2P43241 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms