Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.48■□□□□ 0.07
HttP42859 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.48■□□□□ 0.07
HttP42859 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Gm7593-201ENSMUST00000187246 644 ntBASIC15.48■□□□□ 0.07
HttP42859 Gm3222-201ENSMUST00000071282 990 ntBASIC15.48■□□□□ 0.07
HttP42859 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HttP42859 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.48■□□□□ 0.07
HttP42859 Gm13612-201ENSMUST00000119276 390 ntBASIC15.48■□□□□ 0.07
HttP42859 Gm17795-201ENSMUST00000214505 757 ntBASIC15.48■□□□□ 0.07
HttP42859 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HttP42859 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.47■□□□□ 0.07
HttP42859 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.47■□□□□ 0.07
HttP42859 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.47■□□□□ 0.07
HttP42859 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.47■□□□□ 0.07
HttP42859 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.47■□□□□ 0.07
HttP42859 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HttP42859 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
HttP42859 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Gm14263-201ENSMUST00000117955 746 ntBASIC15.46■□□□□ 0.07
HttP42859 Gm11803-201ENSMUST00000119966 444 ntBASIC15.46■□□□□ 0.07
HttP42859 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.46■□□□□ 0.07
HttP42859 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.46■□□□□ 0.07
HttP42859 Gm6983-201ENSMUST00000214912 628 ntBASIC15.46■□□□□ 0.07
HttP42859 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.46■□□□□ 0.07
HttP42859 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
HttP42859 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.46■□□□□ 0.07
HttP42859 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.46■□□□□ 0.07
HttP42859 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.46■□□□□ 0.07
HttP42859 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.46■□□□□ 0.07
HttP42859 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HttP42859 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HttP42859 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HttP42859 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HttP42859 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.46■□□□□ 0.06
HttP42859 Gm26464-201ENSMUST00000157094 305 ntBASIC15.46■□□□□ 0.06
HttP42859 Gm27341-201ENSMUST00000183570 106 ntBASIC15.46■□□□□ 0.06
HttP42859 Gm43133-201ENSMUST00000197472 463 ntBASIC15.46■□□□□ 0.06
HttP42859 Olfr286-202ENSMUST00000205305 969 ntBASIC15.46■□□□□ 0.06
HttP42859 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.46■□□□□ 0.06
HttP42859 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
HttP42859 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.45■□□□□ 0.06
HttP42859 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HttP42859 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.45■□□□□ 0.06
HttP42859 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 B9d1os-201ENSMUST00000137010 674 ntBASIC15.45■□□□□ 0.06
HttP42859 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.45■□□□□ 0.06
HttP42859 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HttP42859 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms