Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox6P40645 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sox6P40645 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox6P40645 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sox6P40645 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox6P40645 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.91□□□□□ -0.18
Sox6P40645 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Sox6P40645 Gm7862-201ENSMUST00000121461 292 ntBASIC13.91□□□□□ -0.18
Sox6P40645 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.91□□□□□ -0.18
Sox6P40645 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox6P40645 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sox6P40645 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox6P40645 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox6P40645 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.9□□□□□ -0.18
Sox6P40645 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox6P40645 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox6P40645 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox6P40645 Gm6089-201ENSMUST00000197666 938 ntBASIC13.9□□□□□ -0.18
Sox6P40645 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox6P40645 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.9□□□□□ -0.18
Sox6P40645 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.9□□□□□ -0.18
Sox6P40645 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.9□□□□□ -0.18
Sox6P40645 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox6P40645 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Sox6P40645 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sox6P40645 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox6P40645 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox6P40645 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Sox6P40645 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox6P40645 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox6P40645 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox6P40645 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox6P40645 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Gm15358-201ENSMUST00000119249 520 ntBASIC13.89□□□□□ -0.19
Sox6P40645 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox6P40645 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.89□□□□□ -0.19
Sox6P40645 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox6P40645 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sox6P40645 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.89□□□□□ -0.19
Sox6P40645 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox6P40645 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.88□□□□□ -0.19
Sox6P40645 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox6P40645 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms