Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mir1894-201ENSMUST00000122802 81 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm17420-201ENSMUST00000164753 153 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm6244-201ENSMUST00000178732 841 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Mir7654-201ENSMUST00000185082 70 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.14■□□□□ 0.01
Cxcl12P40224 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.14■□□□□ 0.01
Cxcl12P40224 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cxcl12P40224 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.14■□□□□ 0.01
Cxcl12P40224 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cxcl12P40224 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Cxcl12P40224 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Cxcl12P40224 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.13■□□□□ 0.01
Cxcl12P40224 Gm42693-201ENSMUST00000196779 631 ntBASIC15.13■□□□□ 0.01
Cxcl12P40224 Gm2451-201ENSMUST00000199447 999 ntBASIC15.13■□□□□ 0.01
Cxcl12P40224 Gm10290-201ENSMUST00000200451 999 ntBASIC15.13■□□□□ 0.01
Cxcl12P40224 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Gm10478-201ENSMUST00000084451 396 ntBASIC15.13■□□□□ 0.01
Cxcl12P40224 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cxcl12P40224 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cxcl12P40224 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cxcl12P40224 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cxcl12P40224 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Mir1247-201ENSMUST00000116706 82 ntBASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm15460-201ENSMUST00000118147 391 ntBASIC15.12■□□□□ 0.01
Cxcl12P40224 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm18307-201ENSMUST00000206864 949 ntBASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.12■□□□□ 0.01
Cxcl12P40224 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.12■□□□□ 0.01
Cxcl12P40224 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cxcl12P40224 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Gm8062-201ENSMUST00000139696 444 ntBASIC15.11■□□□□ 0.01
Cxcl12P40224 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cxcl12P40224 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cxcl12P40224 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.11■□□□□ 0.01
Cxcl12P40224 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.11■□□□□ 0.01
Cxcl12P40224 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.11■□□□□ 0.01
Cxcl12P40224 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.11■□□□□ 0.01
Cxcl12P40224 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms