Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Nedd8P29595 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nedd8P29595 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Gm16061-201ENSMUST00000122167 857 ntBASIC13.69□□□□□ -0.22
Nedd8P29595 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.69□□□□□ -0.22
Nedd8P29595 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nedd8P29595 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.69□□□□□ -0.22
Nedd8P29595 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Nedd8P29595 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nedd8P29595 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nedd8P29595 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd8P29595 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.68□□□□□ -0.22
Nedd8P29595 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nedd8P29595 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.68□□□□□ -0.22
Nedd8P29595 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Nedd8P29595 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.68□□□□□ -0.22
Nedd8P29595 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd8P29595 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nedd8P29595 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Celf4-206ENSMUST00000224553 1729 ntBASIC13.67□□□□□ -0.22
Nedd8P29595 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nedd8P29595 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Nedd8P29595 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.67□□□□□ -0.22
Nedd8P29595 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nedd8P29595 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nedd8P29595 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nedd8P29595 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nedd8P29595 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nedd8P29595 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nedd8P29595 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nedd8P29595 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Nedd8P29595 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms