Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.93■□□□□ 0.3
Vcam1P29533 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Vcam1P29533 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Vcam1P29533 Gm3436-201ENSMUST00000179930 840 ntBASIC16.93■□□□□ 0.3
Vcam1P29533 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.93■□□□□ 0.3
Vcam1P29533 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Mir125a-201ENSMUST00000083545 68 ntBASIC16.93■□□□□ 0.3
Vcam1P29533 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.93■□□□□ 0.3
Vcam1P29533 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.93■□□□□ 0.3
Vcam1P29533 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Vcam1P29533 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vcam1P29533 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.92■□□□□ 0.3
Vcam1P29533 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vcam1P29533 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.92■□□□□ 0.3
Vcam1P29533 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Vcam1P29533 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.92■□□□□ 0.3
Vcam1P29533 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcam1P29533 BC001981-202ENSMUST00000191393 1545 ntBASIC16.91■□□□□ 0.3
Vcam1P29533 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.91■□□□□ 0.3
Vcam1P29533 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Vcam1P29533 Gm10275-202ENSMUST00000168697 495 ntBASIC16.91■□□□□ 0.3
Vcam1P29533 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.91■□□□□ 0.3
Vcam1P29533 Gm6218-201ENSMUST00000219812 628 ntBASIC16.91■□□□□ 0.3
Vcam1P29533 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.91■□□□□ 0.3
Vcam1P29533 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vcam1P29533 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vcam1P29533 Gm10275-201ENSMUST00000092620 635 ntBASIC16.91■□□□□ 0.3
Vcam1P29533 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vcam1P29533 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vcam1P29533 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.91■□□□□ 0.3
Vcam1P29533 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vcam1P29533 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.9■□□□□ 0.3
Vcam1P29533 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.9■□□□□ 0.3
Vcam1P29533 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.9■□□□□ 0.3
Vcam1P29533 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vcam1P29533 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.9■□□□□ 0.3
Vcam1P29533 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.9■□□□□ 0.3
Vcam1P29533 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.9■□□□□ 0.3
Vcam1P29533 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.9■□□□□ 0.3
Vcam1P29533 Gm9229-201ENSMUST00000222777 126 ntBASIC16.9■□□□□ 0.3
Vcam1P29533 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms