Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.66□□□□□ -0.22
Cd40lgP27548 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.66□□□□□ -0.22
Cd40lgP27548 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Mir3113-201ENSMUST00000175478 76 ntBASIC13.66□□□□□ -0.22
Cd40lgP27548 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.66□□□□□ -0.22
Cd40lgP27548 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.66□□□□□ -0.22
Cd40lgP27548 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd40lgP27548 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd40lgP27548 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Gm11594-201ENSMUST00000122313 162 ntBASIC13.65□□□□□ -0.22
Cd40lgP27548 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.65□□□□□ -0.22
Cd40lgP27548 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.65□□□□□ -0.22
Cd40lgP27548 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.65□□□□□ -0.22
Cd40lgP27548 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cd40lgP27548 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd40lgP27548 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cd40lgP27548 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Cd40lgP27548 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cd40lgP27548 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Cd40lgP27548 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.64□□□□□ -0.23
Cd40lgP27548 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.64□□□□□ -0.23
Cd40lgP27548 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.64□□□□□ -0.23
Cd40lgP27548 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.64□□□□□ -0.23
Cd40lgP27548 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.64□□□□□ -0.23
Cd40lgP27548 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Cd40lgP27548 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd40lgP27548 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms