Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cntn1P12960 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cntn1P12960 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cntn1P12960 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cntn1P12960 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.19□□□□□ -0.14
Cntn1P12960 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cntn1P12960 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.19□□□□□ -0.14
Cntn1P12960 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Gm13616-201ENSMUST00000120600 222 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 Gm11543-201ENSMUST00000120758 370 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cntn1P12960 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.18□□□□□ -0.14
Cntn1P12960 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.18□□□□□ -0.14
Cntn1P12960 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.18□□□□□ -0.14
Cntn1P12960 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.18□□□□□ -0.14
Cntn1P12960 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cntn1P12960 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cntn1P12960 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cntn1P12960 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cntn1P12960 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cntn1P12960 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.17□□□□□ -0.14
Cntn1P12960 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cntn1P12960 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn1P12960 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cntn1P12960 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.16□□□□□ -0.14
Cntn1P12960 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.16□□□□□ -0.14
Cntn1P12960 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.16□□□□□ -0.14
Cntn1P12960 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cntn1P12960 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn1P12960 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms