Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.35■□□□□ 0.21
Hoxc6P10629 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hoxc6P10629 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Hoxc6P10629 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hoxc6P10629 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hoxc6P10629 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.34■□□□□ 0.21
Hoxc6P10629 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.34■□□□□ 0.21
Hoxc6P10629 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.34■□□□□ 0.21
Hoxc6P10629 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hoxc6P10629 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Hoxc6P10629 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc6P10629 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc6P10629 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.33■□□□□ 0.21
Hoxc6P10629 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc6P10629 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc6P10629 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.33■□□□□ 0.21
Hoxc6P10629 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc6P10629 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc6P10629 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc6P10629 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hoxc6P10629 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.33■□□□□ 0.2
Hoxc6P10629 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hoxc6P10629 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hoxc6P10629 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxc6P10629 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.32■□□□□ 0.2
Hoxc6P10629 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.32■□□□□ 0.2
Hoxc6P10629 Gm12091-201ENSMUST00000146791 830 ntBASIC16.32■□□□□ 0.2
Hoxc6P10629 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.32■□□□□ 0.2
Hoxc6P10629 Gm37917-201ENSMUST00000194711 392 ntBASIC16.32■□□□□ 0.2
Hoxc6P10629 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.32■□□□□ 0.2
Hoxc6P10629 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.32■□□□□ 0.2
Hoxc6P10629 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxc6P10629 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.31■□□□□ 0.2
Hoxc6P10629 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Hoxc6P10629 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc6P10629 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxc6P10629 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hoxc6P10629 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms