Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Rc3h2P0C090 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rc3h2P0C090 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rc3h2P0C090 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.04■□□□□ -0
Rc3h2P0C090 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.04■□□□□ -0
Rc3h2P0C090 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.04■□□□□ -0
Rc3h2P0C090 Gm17837-201ENSMUST00000186435 985 ntBASIC15.04■□□□□ -0
Rc3h2P0C090 Gm18766-201ENSMUST00000189811 808 ntBASIC15.04■□□□□ -0
Rc3h2P0C090 Gm38294-201ENSMUST00000192831 381 ntBASIC15.04■□□□□ -0
Rc3h2P0C090 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rc3h2P0C090 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.04■□□□□ -0
Rc3h2P0C090 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.04■□□□□ -0
Rc3h2P0C090 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h2P0C090 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rc3h2P0C090 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rc3h2P0C090 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Rc3h2P0C090 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.03■□□□□ -0
Rc3h2P0C090 Gm8410-201ENSMUST00000117225 605 ntBASIC15.03■□□□□ -0
Rc3h2P0C090 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Gm27306-201ENSMUST00000183970 107 ntBASIC15.03■□□□□ -0
Rc3h2P0C090 Gm28630-201ENSMUST00000187806 498 ntBASIC15.03■□□□□ -0
Rc3h2P0C090 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h2P0C090 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h2P0C090 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.03■□□□□ -0
Rc3h2P0C090 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h2P0C090 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h2P0C090 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Rc3h2P0C090 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h2P0C090 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rc3h2P0C090 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rc3h2P0C090 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.02■□□□□ -0
Rc3h2P0C090 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.02■□□□□ -0
Rc3h2P0C090 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h2P0C090 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rc3h2P0C090 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rc3h2P0C090 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rc3h2P0C090 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms