Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NeflP08551 Gm8097-201ENSMUST00000117903 829 ntBASIC19.26■□□□□ 0.67
NeflP08551 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.26■□□□□ 0.67
NeflP08551 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NeflP08551 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NeflP08551 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NeflP08551 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NeflP08551 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NeflP08551 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Carlr-201ENSMUST00000181515 2574 ntBASIC19.26■□□□□ 0.67
NeflP08551 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NeflP08551 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NeflP08551 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
NeflP08551 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NeflP08551 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NeflP08551 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.25■□□□□ 0.67
NeflP08551 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NeflP08551 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NeflP08551 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NeflP08551 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.24■□□□□ 0.67
NeflP08551 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NeflP08551 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.24■□□□□ 0.67
NeflP08551 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.24■□□□□ 0.67
NeflP08551 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.24■□□□□ 0.67
NeflP08551 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.24■□□□□ 0.67
NeflP08551 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
NeflP08551 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NeflP08551 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC19.24■□□□□ 0.67
NeflP08551 AC167013.2-201ENSMUST00000228520 2684 ntBASIC19.24■□□□□ 0.67
NeflP08551 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NeflP08551 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NeflP08551 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.23■□□□□ 0.67
NeflP08551 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NeflP08551 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NeflP08551 Gm10499-201ENSMUST00000174094 934 ntBASIC19.23■□□□□ 0.67
NeflP08551 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.23■□□□□ 0.67
NeflP08551 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC19.23■□□□□ 0.67
NeflP08551 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC19.23■□□□□ 0.67
NeflP08551 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NeflP08551 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NeflP08551 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NeflP08551 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms