Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
ApoeP08226 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.01□□□□□ -0.17
ApoeP08226 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ApoeP08226 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14□□□□□ -0.17
ApoeP08226 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14□□□□□ -0.17
ApoeP08226 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ApoeP08226 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ApoeP08226 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ApoeP08226 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Gm27742-201ENSMUST00000184667 60 ntBASIC13.99□□□□□ -0.17
ApoeP08226 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ApoeP08226 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ApoeP08226 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ApoeP08226 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ApoeP08226 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
ApoeP08226 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ApoeP08226 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ApoeP08226 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.98□□□□□ -0.17
ApoeP08226 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ApoeP08226 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ApoeP08226 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms