Protein–RNA interactions for Protein: P06909

Cfh, Complement factor H, mousemouse

Predictions only

Length 1,234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfhP06909 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.12■□□□□ 0.33
CfhP06909 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CfhP06909 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.12■□□□□ 0.33
CfhP06909 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CfhP06909 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CfhP06909 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CfhP06909 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm27514-201ENSMUST00000183692 110 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm18056-201ENSMUST00000207670 568 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm18061-201ENSMUST00000208350 562 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm18063-201ENSMUST00000208529 568 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm18052-201ENSMUST00000208750 559 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm6013-201ENSMUST00000212264 699 ntBASIC17.11■□□□□ 0.33
CfhP06909 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.11■□□□□ 0.33
CfhP06909 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CfhP06909 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CfhP06909 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfhP06909 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CfhP06909 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CfhP06909 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.1■□□□□ 0.33
CfhP06909 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CfhP06909 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Gm9726-201ENSMUST00000180321 678 ntBASIC17.1■□□□□ 0.33
CfhP06909 Gm4804-201ENSMUST00000182234 999 ntBASIC17.1■□□□□ 0.33
CfhP06909 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.1■□□□□ 0.33
CfhP06909 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.1■□□□□ 0.33
CfhP06909 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.1■□□□□ 0.33
CfhP06909 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.1■□□□□ 0.33
CfhP06909 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfhP06909 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CfhP06909 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.09■□□□□ 0.33
CfhP06909 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.09■□□□□ 0.33
CfhP06909 Gm12384-201ENSMUST00000119228 919 ntBASIC17.09■□□□□ 0.33
CfhP06909 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.09■□□□□ 0.33
CfhP06909 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.09■□□□□ 0.33
CfhP06909 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.09■□□□□ 0.33
CfhP06909 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CfhP06909 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CfhP06909 Gm10012-201ENSMUST00000078252 192 ntBASIC17.09■□□□□ 0.33
CfhP06909 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.09■□□□□ 0.33
CfhP06909 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfhP06909 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CfhP06909 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CfhP06909 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CfhP06909 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CfhP06909 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CfhP06909 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CfhP06909 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CfhP06909 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CfhP06909 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.08■□□□□ 0.32
CfhP06909 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CfhP06909 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CfhP06909 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.08■□□□□ 0.32
CfhP06909 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms