Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
P06336 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.66□□□□□ -0.22
P06336 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Rpph1-201ENSMUST00000175096 319 ntBASIC13.66□□□□□ -0.22
P06336 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.66□□□□□ -0.22
P06336 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.66□□□□□ -0.22
P06336 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.66□□□□□ -0.22
P06336 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.66□□□□□ -0.22
P06336 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P06336 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.66□□□□□ -0.22
P06336 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.66□□□□□ -0.22
P06336 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06336 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.65□□□□□ -0.22
P06336 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
P06336 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
P06336 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.65□□□□□ -0.22
P06336 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.65□□□□□ -0.22
P06336 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.65□□□□□ -0.22
P06336 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.65□□□□□ -0.22
P06336 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.65□□□□□ -0.22
P06336 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.65□□□□□ -0.22
P06336 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.65□□□□□ -0.22
P06336 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P06336 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P06336 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06336 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
P06336 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.64□□□□□ -0.23
P06336 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
P06336 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
P06336 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
P06336 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.64□□□□□ -0.23
P06336 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.64□□□□□ -0.23
P06336 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.64□□□□□ -0.23
P06336 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.64□□□□□ -0.23
P06336 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.64□□□□□ -0.23
P06336 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.64□□□□□ -0.23
P06336 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P06336 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
P06336 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06336 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06336 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms