Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PrnpP04925 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PrnpP04925 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.26■□□□□ 0.03
PrnpP04925 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.26■□□□□ 0.03
PrnpP04925 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Gm37230-201ENSMUST00000194491 818 ntBASIC15.26■□□□□ 0.03
PrnpP04925 Gm8515-201ENSMUST00000194852 576 ntBASIC15.26■□□□□ 0.03
PrnpP04925 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PrnpP04925 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PrnpP04925 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PrnpP04925 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.26■□□□□ 0.03
PrnpP04925 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PrnpP04925 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PrnpP04925 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PrnpP04925 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.25■□□□□ 0.03
PrnpP04925 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.25■□□□□ 0.03
PrnpP04925 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.25■□□□□ 0.03
PrnpP04925 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Gm22189-201ENSMUST00000103822 86 ntBASIC15.25■□□□□ 0.03
PrnpP04925 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PrnpP04925 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.25■□□□□ 0.03
PrnpP04925 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.25■□□□□ 0.03
PrnpP04925 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.25■□□□□ 0.03
PrnpP04925 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PrnpP04925 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PrnpP04925 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Gm14127-201ENSMUST00000117906 678 ntBASIC15.24■□□□□ 0.03
PrnpP04925 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.24■□□□□ 0.03
PrnpP04925 Gm9522-201ENSMUST00000182394 926 ntBASIC15.24■□□□□ 0.03
PrnpP04925 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 AA619741-201ENSMUST00000195095 646 ntBASIC15.24■□□□□ 0.03
PrnpP04925 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.24■□□□□ 0.03
PrnpP04925 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PrnpP04925 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PrnpP04925 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PrnpP04925 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PrnpP04925 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PrnpP04925 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PrnpP04925 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms