Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.73□□□□□ -0.53
P01643 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P01643 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P01643 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P01643 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
P01643 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Gm5479-201ENSMUST00000160578 435 ntBASIC11.73□□□□□ -0.53
P01643 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.73□□□□□ -0.53
P01643 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.73□□□□□ -0.53
P01643 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
P01643 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P01643 Gm17837-201ENSMUST00000186435 985 ntBASIC11.73□□□□□ -0.53
P01643 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.73□□□□□ -0.53
P01643 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
P01643 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.73□□□□□ -0.53
P01643 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.73□□□□□ -0.53
P01643 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P01643 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01643 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.72□□□□□ -0.53
P01643 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
P01643 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P01643 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.72□□□□□ -0.53
P01643 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P01643 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.72□□□□□ -0.53
P01643 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.72□□□□□ -0.53
P01643 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
P01643 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.72□□□□□ -0.53
P01643 Gm38294-201ENSMUST00000192831 381 ntBASIC11.72□□□□□ -0.53
P01643 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.72□□□□□ -0.53
P01643 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.72□□□□□ -0.53
P01643 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.72□□□□□ -0.53
P01643 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.72□□□□□ -0.53
P01643 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.72□□□□□ -0.53
P01643 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P01643 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01643 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms