Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vti1aO89116 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.94■□□□□ 0.14
Vti1aO89116 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vti1aO89116 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vti1aO89116 Gm22065-201ENSMUST00000103753 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm22066-201ENSMUST00000103761 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24932-201ENSMUST00000103763 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24115-201ENSMUST00000103799 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm22190-201ENSMUST00000103827 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm22191-201ENSMUST00000103831 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24721-201ENSMUST00000103849 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm28018-201ENSMUST00000103869 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm26399-201ENSMUST00000103937 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Gm11543-201ENSMUST00000120758 370 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.93■□□□□ 0.14
Vti1aO89116 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 Gm25349-201ENSMUST00000177728 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm23616-201ENSMUST00000177797 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm25871-201ENSMUST00000177816 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24752-201ENSMUST00000178240 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24496-201ENSMUST00000178287 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm25649-201ENSMUST00000178476 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm25548-201ENSMUST00000178681 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm23147-201ENSMUST00000178841 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm26095-201ENSMUST00000179270 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm22171-201ENSMUST00000179283 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm23936-201ENSMUST00000179354 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm22619-201ENSMUST00000179516 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm25255-201ENSMUST00000179579 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24755-201ENSMUST00000179691 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm26506-201ENSMUST00000179692 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm25086-201ENSMUST00000179931 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm23243-201ENSMUST00000180047 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24659-201ENSMUST00000180212 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm24169-201ENSMUST00000180244 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm23689-201ENSMUST00000180354 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm27359-201ENSMUST00000184153 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm27785-201ENSMUST00000184268 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm27466-201ENSMUST00000184396 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm27703-201ENSMUST00000184836 110 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vti1aO89116 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vti1aO89116 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vti1aO89116 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.93■□□□□ 0.14
Vti1aO89116 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.92■□□□□ 0.14
Vti1aO89116 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Vti1aO89116 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vti1aO89116 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.92■□□□□ 0.14
Vti1aO89116 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.92■□□□□ 0.14
Vti1aO89116 Gm27622-201ENSMUST00000183779 60 ntBASIC15.92■□□□□ 0.14
Vti1aO89116 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.92■□□□□ 0.14
Vti1aO89116 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.92■□□□□ 0.14
Vti1aO89116 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vti1aO89116 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vti1aO89116 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Vti1aO89116 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms