Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CopeO89079 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.28■□□□□ 0.04
CopeO89079 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CopeO89079 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.27■□□□□ 0.04
CopeO89079 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CopeO89079 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.27■□□□□ 0.04
CopeO89079 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.27■□□□□ 0.04
CopeO89079 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CopeO89079 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.27■□□□□ 0.03
CopeO89079 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CopeO89079 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.27■□□□□ 0.03
CopeO89079 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CopeO89079 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CopeO89079 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CopeO89079 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.26■□□□□ 0.03
CopeO89079 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CopeO89079 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
CopeO89079 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.26■□□□□ 0.03
CopeO89079 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CopeO89079 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
CopeO89079 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.25■□□□□ 0.03
CopeO89079 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.25■□□□□ 0.03
CopeO89079 Gm18489-201ENSMUST00000172565 551 ntBASIC15.25■□□□□ 0.03
CopeO89079 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CopeO89079 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.25■□□□□ 0.03
CopeO89079 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms