Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Cops6O88545 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.99■□□□□ 0.47
Cops6O88545 Gm15321-201ENSMUST00000121290 288 ntBASIC17.99■□□□□ 0.47
Cops6O88545 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.99■□□□□ 0.47
Cops6O88545 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.99■□□□□ 0.47
Cops6O88545 Gm43703-201ENSMUST00000200523 763 ntBASIC17.99■□□□□ 0.47
Cops6O88545 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.99■□□□□ 0.47
Cops6O88545 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cops6O88545 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cops6O88545 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cops6O88545 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cops6O88545 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cops6O88545 Gm15653-201ENSMUST00000119247 907 ntBASIC17.98■□□□□ 0.47
Cops6O88545 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Gm45453-201ENSMUST00000211758 853 ntBASIC17.98■□□□□ 0.47
Cops6O88545 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cops6O88545 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.98■□□□□ 0.47
Cops6O88545 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Cops6O88545 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cops6O88545 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cops6O88545 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cops6O88545 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cops6O88545 Gm29667-201ENSMUST00000190817 490 ntBASIC17.97■□□□□ 0.47
Cops6O88545 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.97■□□□□ 0.47
Cops6O88545 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cops6O88545 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.97■□□□□ 0.47
Cops6O88545 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.97■□□□□ 0.47
Cops6O88545 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cops6O88545 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cops6O88545 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cops6O88545 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cops6O88545 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cops6O88545 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.96■□□□□ 0.47
Cops6O88545 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cops6O88545 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.96■□□□□ 0.47
Cops6O88545 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cops6O88545 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.96■□□□□ 0.47
Cops6O88545 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.96■□□□□ 0.47
Cops6O88545 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.96■□□□□ 0.47
Cops6O88545 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cops6O88545 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cops6O88545 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms