Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops4O88544 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops4O88544 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops4O88544 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cops4O88544 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cops4O88544 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.68□□□□□ -0.22
Cops4O88544 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cops4O88544 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.68□□□□□ -0.22
Cops4O88544 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Cops4O88544 Gm19164-201ENSMUST00000210667 640 ntBASIC13.68□□□□□ -0.22
Cops4O88544 Gm9172-201ENSMUST00000212092 954 ntBASIC13.68□□□□□ -0.22
Cops4O88544 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.68□□□□□ -0.22
Cops4O88544 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cops4O88544 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cops4O88544 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops4O88544 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Cops4O88544 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cops4O88544 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cops4O88544 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.67□□□□□ -0.22
Cops4O88544 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.67□□□□□ -0.22
Cops4O88544 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cops4O88544 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.67□□□□□ -0.22
Cops4O88544 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.67□□□□□ -0.22
Cops4O88544 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.67□□□□□ -0.22
Cops4O88544 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.67□□□□□ -0.22
Cops4O88544 Gm33142-201ENSMUST00000193913 867 ntBASIC13.67□□□□□ -0.22
Cops4O88544 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.67□□□□□ -0.22
Cops4O88544 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cops4O88544 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cops4O88544 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Grk6-207ENSMUST00000225925 2769 ntBASIC13.67□□□□□ -0.22
Cops4O88544 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.67□□□□□ -0.22
Cops4O88544 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.67□□□□□ -0.22
Cops4O88544 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops4O88544 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cops4O88544 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Cops4O88544 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.66□□□□□ -0.22
Cops4O88544 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.66□□□□□ -0.22
Cops4O88544 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cops4O88544 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.66□□□□□ -0.22
Cops4O88544 Gm14859-201ENSMUST00000117752 357 ntBASIC13.66□□□□□ -0.22
Cops4O88544 Gm15165-201ENSMUST00000118140 502 ntBASIC13.66□□□□□ -0.22
Cops4O88544 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.66□□□□□ -0.22
Cops4O88544 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.66□□□□□ -0.22
Cops4O88544 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cops4O88544 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.66□□□□□ -0.22
Cops4O88544 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cops4O88544 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.66□□□□□ -0.22
Cops4O88544 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms