Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops3O88543 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops3O88543 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cops3O88543 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cops3O88543 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops3O88543 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.27□□□□□ -0.29
Cops3O88543 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.27□□□□□ -0.29
Cops3O88543 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cops3O88543 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cops3O88543 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Cops3O88543 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Cops3O88543 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.27□□□□□ -0.29
Cops3O88543 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cops3O88543 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.26□□□□□ -0.29
Cops3O88543 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.26□□□□□ -0.29
Cops3O88543 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Gm14859-201ENSMUST00000117752 357 ntBASIC13.26□□□□□ -0.29
Cops3O88543 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.26□□□□□ -0.29
Cops3O88543 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.26□□□□□ -0.29
Cops3O88543 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cops3O88543 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Gm17807-201ENSMUST00000186869 298 ntBASIC13.26□□□□□ -0.29
Cops3O88543 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cops3O88543 Gm43767-201ENSMUST00000198933 381 ntBASIC13.26□□□□□ -0.29
Cops3O88543 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.26□□□□□ -0.29
Cops3O88543 Rubie-203ENSMUST00000227803 2430 ntBASIC13.26□□□□□ -0.29
Cops3O88543 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Cops3O88543 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.26□□□□□ -0.29
Cops3O88543 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cops3O88543 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cops3O88543 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.25□□□□□ -0.29
Cops3O88543 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cops3O88543 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cops3O88543 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.25□□□□□ -0.29
Cops3O88543 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.25□□□□□ -0.29
Cops3O88543 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.25□□□□□ -0.29
Cops3O88543 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.25□□□□□ -0.29
Cops3O88543 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.25□□□□□ -0.29
Cops3O88543 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cops3O88543 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Cops3O88543 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cops3O88543 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cops3O88543 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cops3O88543 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.25□□□□□ -0.29
Cops3O88543 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cops3O88543 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms