Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tulp3O88413 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tulp3O88413 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tulp3O88413 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Tulp3O88413 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.82□□□□□ -0.2
Tulp3O88413 Gm15372-201ENSMUST00000120729 834 ntBASIC13.82□□□□□ -0.2
Tulp3O88413 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.82□□□□□ -0.2
Tulp3O88413 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tulp3O88413 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tulp3O88413 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.82□□□□□ -0.2
Tulp3O88413 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tulp3O88413 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Tulp3O88413 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Tulp3O88413 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.81□□□□□ -0.2
Tulp3O88413 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.81□□□□□ -0.2
Tulp3O88413 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.81□□□□□ -0.2
Tulp3O88413 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Tulp3O88413 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.81□□□□□ -0.2
Tulp3O88413 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tulp3O88413 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tulp3O88413 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.8□□□□□ -0.2
Tulp3O88413 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.8□□□□□ -0.2
Tulp3O88413 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.8□□□□□ -0.2
Tulp3O88413 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.8□□□□□ -0.2
Tulp3O88413 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.8□□□□□ -0.2
Tulp3O88413 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tulp3O88413 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tulp3O88413 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms