Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vti1bO88384 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.12□□□□□ -0.15
Vti1bO88384 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vti1bO88384 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.12□□□□□ -0.15
Vti1bO88384 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.12□□□□□ -0.15
Vti1bO88384 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm10060-201ENSMUST00000212002 111 ntBASIC14.12□□□□□ -0.15
Vti1bO88384 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Vti1bO88384 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vti1bO88384 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vti1bO88384 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Vti1bO88384 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vti1bO88384 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.11□□□□□ -0.15
Vti1bO88384 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vti1bO88384 Gm18195-201ENSMUST00000207604 706 ntBASIC14.11□□□□□ -0.15
Vti1bO88384 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.11□□□□□ -0.15
Vti1bO88384 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vti1bO88384 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vti1bO88384 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.11□□□□□ -0.15
Vti1bO88384 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Vti1bO88384 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vti1bO88384 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vti1bO88384 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vti1bO88384 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.1□□□□□ -0.15
Vti1bO88384 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vti1bO88384 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.1□□□□□ -0.15
Vti1bO88384 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Vti1bO88384 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.1□□□□□ -0.15
Vti1bO88384 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.1□□□□□ -0.15
Vti1bO88384 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vti1bO88384 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.1□□□□□ -0.15
Vti1bO88384 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Vti1bO88384 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vti1bO88384 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vti1bO88384 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vti1bO88384 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vti1bO88384 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms