Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ubr1O70481 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Mir7085-201ENSMUST00000184353 66 ntBASIC18.91■□□□□ 0.62
Ubr1O70481 Mir7654-201ENSMUST00000185082 70 ntBASIC18.91■□□□□ 0.62
Ubr1O70481 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ubr1O70481 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ubr1O70481 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.91■□□□□ 0.62
Ubr1O70481 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ubr1O70481 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ubr1O70481 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ubr1O70481 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.9■□□□□ 0.62
Ubr1O70481 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.9■□□□□ 0.62
Ubr1O70481 Gm8602-201ENSMUST00000184045 607 ntBASIC18.9■□□□□ 0.62
Ubr1O70481 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ubr1O70481 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Ubr1O70481 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ubr1O70481 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubr1O70481 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ubr1O70481 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ubr1O70481 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ubr1O70481 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.89■□□□□ 0.61
Ubr1O70481 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ubr1O70481 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ubr1O70481 Gm8463-201ENSMUST00000208573 613 ntBASIC18.89■□□□□ 0.61
Ubr1O70481 Gm5425-201ENSMUST00000214125 459 ntBASIC18.89■□□□□ 0.61
Ubr1O70481 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.89■□□□□ 0.61
Ubr1O70481 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubr1O70481 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.89■□□□□ 0.61
Ubr1O70481 Carlr-201ENSMUST00000181515 2574 ntBASIC18.89■□□□□ 0.61
Ubr1O70481 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ubr1O70481 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.88■□□□□ 0.61
Ubr1O70481 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Mir1894-201ENSMUST00000122802 81 ntBASIC18.88■□□□□ 0.61
Ubr1O70481 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.88■□□□□ 0.61
Ubr1O70481 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ubr1O70481 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ubr1O70481 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.88■□□□□ 0.61
Ubr1O70481 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ubr1O70481 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ubr1O70481 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.88■□□□□ 0.61
Ubr1O70481 Gm5035-201ENSMUST00000215581 927 ntBASIC18.88■□□□□ 0.61
Ubr1O70481 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.88■□□□□ 0.61
Ubr1O70481 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubr1O70481 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ubr1O70481 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ubr1O70481 Gm15240-201ENSMUST00000118156 720 ntBASIC18.87■□□□□ 0.61
Ubr1O70481 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.87■□□□□ 0.61
Ubr1O70481 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ubr1O70481 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.87■□□□□ 0.61
Ubr1O70481 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Ubr1O70481 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubr1O70481 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms