Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rdh5O55240 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rdh5O55240 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.01□□□□□ -0.17
Rdh5O55240 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.01□□□□□ -0.17
Rdh5O55240 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Gm6736-201ENSMUST00000166583 948 ntBASIC14.01□□□□□ -0.17
Rdh5O55240 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.01□□□□□ -0.17
Rdh5O55240 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.01□□□□□ -0.17
Rdh5O55240 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rdh5O55240 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rdh5O55240 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rdh5O55240 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14□□□□□ -0.17
Rdh5O55240 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Carlr-201ENSMUST00000181515 2574 ntBASIC14□□□□□ -0.17
Rdh5O55240 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rdh5O55240 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rdh5O55240 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14□□□□□ -0.17
Rdh5O55240 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Rdh5O55240 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14□□□□□ -0.17
Rdh5O55240 Mir7036b-201ENSMUST00000184791 63 ntBASIC14□□□□□ -0.17
Rdh5O55240 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14□□□□□ -0.17
Rdh5O55240 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Rdh5O55240 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14□□□□□ -0.17
Rdh5O55240 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Rdh5O55240 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rdh5O55240 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rdh5O55240 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.99□□□□□ -0.17
Rdh5O55240 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.99□□□□□ -0.17
Rdh5O55240 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
Rdh5O55240 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Gm27702-201ENSMUST00000184512 56 ntBASIC13.99□□□□□ -0.17
Rdh5O55240 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rdh5O55240 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rdh5O55240 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms