Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm27301-201ENSMUST00000184012 127 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm45747-201ENSMUST00000212203 999 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm10154-201ENSMUST00000084445 354 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.03□□□□□ -0.64
Rpl35aO55142 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl35aO55142 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.03□□□□□ -0.64
Rpl35aO55142 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Rpl35aO55142 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Rpl35aO55142 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rpl35aO55142 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Gm2756-201ENSMUST00000195851 400 ntBASIC11.02□□□□□ -0.65
Rpl35aO55142 Gm43575-201ENSMUST00000196420 516 ntBASIC11.02□□□□□ -0.65
Rpl35aO55142 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rpl35aO55142 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rpl35aO55142 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.01□□□□□ -0.65
Rpl35aO55142 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.01□□□□□ -0.65
Rpl35aO55142 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rpl35aO55142 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rpl35aO55142 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms