Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm23984-201ENSMUST00000157139 203 ntBASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Mir125a-201ENSMUST00000083545 68 ntBASIC16.21■□□□□ 0.19
Trdmt1O55055 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdmt1O55055 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdmt1O55055 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdmt1O55055 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trdmt1O55055 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdmt1O55055 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.2■□□□□ 0.18
Trdmt1O55055 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Gm14127-201ENSMUST00000117906 678 ntBASIC16.2■□□□□ 0.18
Trdmt1O55055 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Gm8515-201ENSMUST00000194852 576 ntBASIC16.2■□□□□ 0.18
Trdmt1O55055 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.2■□□□□ 0.18
Trdmt1O55055 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.2■□□□□ 0.18
Trdmt1O55055 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trdmt1O55055 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trdmt1O55055 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdmt1O55055 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.19■□□□□ 0.18
Trdmt1O55055 Gm6912-201ENSMUST00000117218 544 ntBASIC16.19■□□□□ 0.18
Trdmt1O55055 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.19■□□□□ 0.18
Trdmt1O55055 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.19■□□□□ 0.18
Trdmt1O55055 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.19■□□□□ 0.18
Trdmt1O55055 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.19■□□□□ 0.18
Trdmt1O55055 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trdmt1O55055 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdmt1O55055 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.18■□□□□ 0.18
Trdmt1O55055 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdmt1O55055 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trdmt1O55055 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.18■□□□□ 0.18
Trdmt1O55055 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.18■□□□□ 0.18
Trdmt1O55055 Gm21854-201ENSMUST00000179901 471 ntBASIC16.18■□□□□ 0.18
Trdmt1O55055 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.18■□□□□ 0.18
Trdmt1O55055 AA619741-201ENSMUST00000195095 646 ntBASIC16.18■□□□□ 0.18
Trdmt1O55055 Gm18187-201ENSMUST00000196476 984 ntBASIC16.18■□□□□ 0.18
Trdmt1O55055 Gm18018-201ENSMUST00000198273 408 ntBASIC16.18■□□□□ 0.18
Trdmt1O55055 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.18■□□□□ 0.18
Trdmt1O55055 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms