Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.07■□□□□ 0
Banf1O54962 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Banf1O54962 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.06■□□□□ 0
Banf1O54962 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Banf1O54962 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.06■□□□□ 0
Banf1O54962 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.06■□□□□ 0
Banf1O54962 Gm21362-201ENSMUST00000194272 928 ntBASIC15.06■□□□□ 0
Banf1O54962 Gm45167-201ENSMUST00000208007 322 ntBASIC15.06■□□□□ 0
Banf1O54962 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.06■□□□□ 0
Banf1O54962 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Banf1O54962 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Banf1O54962 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Banf1O54962 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Banf1O54962 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Banf1O54962 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Banf1O54962 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Banf1O54962 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Banf1O54962 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.05■□□□□ 0
Banf1O54962 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.05■□□□□ -0
Banf1O54962 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.05■□□□□ -0
Banf1O54962 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Banf1O54962 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.05■□□□□ -0
Banf1O54962 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.05■□□□□ -0
Banf1O54962 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.05■□□□□ -0
Banf1O54962 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.05■□□□□ -0
Banf1O54962 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Banf1O54962 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.04■□□□□ -0
Banf1O54962 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Banf1O54962 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Banf1O54962 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.04■□□□□ -0
Banf1O54962 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.04■□□□□ -0
Banf1O54962 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.04■□□□□ -0
Banf1O54962 Gm24589-201ENSMUST00000116692 94 ntBASIC15.04■□□□□ -0
Banf1O54962 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.04■□□□□ -0
Banf1O54962 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.04■□□□□ -0
Banf1O54962 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.04■□□□□ -0
Banf1O54962 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.04■□□□□ -0
Banf1O54962 Gm6376-201ENSMUST00000209407 580 ntBASIC15.04■□□□□ -0
Banf1O54962 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.04■□□□□ -0
Banf1O54962 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms