Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Itgb3O54890 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.68■□□□□ 0.1
Itgb3O54890 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.68■□□□□ 0.1
Itgb3O54890 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Mir449b-201ENSMUST00000104833 80 ntBASIC15.67■□□□□ 0.1
Itgb3O54890 Gm13616-201ENSMUST00000120600 222 ntBASIC15.67■□□□□ 0.1
Itgb3O54890 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Itgb3O54890 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.67■□□□□ 0.1
Itgb3O54890 Gm24158-201ENSMUST00000175263 71 ntBASIC15.67■□□□□ 0.1
Itgb3O54890 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.67■□□□□ 0.1
Itgb3O54890 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.67■□□□□ 0.1
Itgb3O54890 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Itgb3O54890 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Itgb3O54890 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Itgb3O54890 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.66■□□□□ 0.1
Itgb3O54890 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Itgb3O54890 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Itgb3O54890 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.66■□□□□ 0.1
Itgb3O54890 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Gm25948-201ENSMUST00000175334 112 ntBASIC15.66■□□□□ 0.1
Itgb3O54890 Gm7774-201ENSMUST00000200064 533 ntBASIC15.66■□□□□ 0.1
Itgb3O54890 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.66■□□□□ 0.1
Itgb3O54890 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.66■□□□□ 0.1
Itgb3O54890 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.66■□□□□ 0.1
Itgb3O54890 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.66■□□□□ 0.1
Itgb3O54890 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.66■□□□□ 0.1
Itgb3O54890 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Itgb3O54890 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.66■□□□□ 0.1
Itgb3O54890 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Itgb3O54890 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.65■□□□□ 0.1
Itgb3O54890 Gm10253-201ENSMUST00000194270 940 ntBASIC15.65■□□□□ 0.1
Itgb3O54890 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Itgb3O54890 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Itgb3O54890 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.65■□□□□ 0.1
Itgb3O54890 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Itgb3O54890 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Itgb3O54890 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Itgb3O54890 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Itgb3O54890 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Itgb3O54890 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Itgb3O54890 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms