Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nr1i3O35627 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.9■□□□□ 0.14
Nr1i3O35627 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.9■□□□□ 0.14
Nr1i3O35627 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nr1i3O35627 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.9■□□□□ 0.14
Nr1i3O35627 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Nr1i3O35627 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.89■□□□□ 0.13
Nr1i3O35627 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.89■□□□□ 0.13
Nr1i3O35627 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nr1i3O35627 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nr1i3O35627 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Gm11452-201ENSMUST00000122376 690 ntBASIC15.89■□□□□ 0.13
Nr1i3O35627 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.89■□□□□ 0.13
Nr1i3O35627 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.89■□□□□ 0.13
Nr1i3O35627 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.89■□□□□ 0.13
Nr1i3O35627 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.89■□□□□ 0.13
Nr1i3O35627 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1i3O35627 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Nr1i3O35627 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nr1i3O35627 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nr1i3O35627 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.88■□□□□ 0.13
Nr1i3O35627 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.88■□□□□ 0.13
Nr1i3O35627 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.88■□□□□ 0.13
Nr1i3O35627 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.88■□□□□ 0.13
Nr1i3O35627 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.88■□□□□ 0.13
Nr1i3O35627 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.88■□□□□ 0.13
Nr1i3O35627 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1i3O35627 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Gm27300-201ENSMUST00000184085 97 ntBASIC15.87■□□□□ 0.13
Nr1i3O35627 Gm27335-201ENSMUST00000184758 97 ntBASIC15.87■□□□□ 0.13
Nr1i3O35627 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Nr1i3O35627 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Nr1i3O35627 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1i3O35627 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms