Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk4O35493 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clk4O35493 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.24□□□□□ -0.13
Clk4O35493 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Gm12008-201ENSMUST00000117791 755 ntBASIC14.24□□□□□ -0.13
Clk4O35493 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.24□□□□□ -0.13
Clk4O35493 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.24□□□□□ -0.13
Clk4O35493 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.24□□□□□ -0.13
Clk4O35493 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.24□□□□□ -0.13
Clk4O35493 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 BC037039-201ENSMUST00000192003 2205 ntBASIC14.24□□□□□ -0.13
Clk4O35493 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clk4O35493 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk4O35493 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Grk6-207ENSMUST00000225925 2769 ntBASIC14.23□□□□□ -0.13
Clk4O35493 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Clk4O35493 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.23□□□□□ -0.13
Clk4O35493 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.23□□□□□ -0.13
Clk4O35493 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Clk4O35493 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.23□□□□□ -0.13
Clk4O35493 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
Clk4O35493 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.23□□□□□ -0.13
Clk4O35493 Gm8000-201ENSMUST00000188378 592 ntBASIC14.23□□□□□ -0.13
Clk4O35493 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.23□□□□□ -0.13
Clk4O35493 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.23□□□□□ -0.13
Clk4O35493 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Clk4O35493 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Clk4O35493 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk4O35493 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.22□□□□□ -0.13
Clk4O35493 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.22□□□□□ -0.13
Clk4O35493 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.22□□□□□ -0.13
Clk4O35493 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.22□□□□□ -0.13
Clk4O35493 Gm11779-201ENSMUST00000118541 368 ntBASIC14.22□□□□□ -0.13
Clk4O35493 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clk4O35493 Gm27525-201ENSMUST00000184465 107 ntBASIC14.22□□□□□ -0.13
Clk4O35493 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.22□□□□□ -0.13
Clk4O35493 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clk4O35493 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms