Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Capn1O35350 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.72□□□□□ -0.21
Capn1O35350 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Capn1O35350 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.72□□□□□ -0.21
Capn1O35350 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.72□□□□□ -0.21
Capn1O35350 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Capn1O35350 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.71□□□□□ -0.21
Capn1O35350 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.71□□□□□ -0.21
Capn1O35350 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Capn1O35350 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Capn1O35350 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.71□□□□□ -0.21
Capn1O35350 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Capn1O35350 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Capn1O35350 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Capn1O35350 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.71□□□□□ -0.21
Capn1O35350 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.71□□□□□ -0.21
Capn1O35350 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Capn1O35350 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Capn1O35350 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Capn1O35350 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Capn1O35350 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Capn1O35350 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.7□□□□□ -0.22
Capn1O35350 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.7□□□□□ -0.22
Capn1O35350 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.7□□□□□ -0.22
Capn1O35350 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Capn1O35350 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.7□□□□□ -0.22
Capn1O35350 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Capn1O35350 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Capn1O35350 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Capn1O35350 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Gm9385-201ENSMUST00000117563 472 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Gm11745-201ENSMUST00000121669 448 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Rpph1-201ENSMUST00000175096 319 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Gm44335-201ENSMUST00000196879 141 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Gm44297-201ENSMUST00000198304 141 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Gm44346-201ENSMUST00000198851 141 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.69□□□□□ -0.22
Capn1O35350 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.69□□□□□ -0.22
Capn1O35350 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.69□□□□□ -0.22
Capn1O35350 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Capn1O35350 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms