Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf11O35235 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm6623-201ENSMUST00000173570 544 ntBASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.55□□□□□ -0.56
Tnfsf11O35235 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Tnfsf11O35235 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.55□□□□□ -0.56
Tnfsf11O35235 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.55□□□□□ -0.56
Tnfsf11O35235 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.54□□□□□ -0.56
Tnfsf11O35235 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.54□□□□□ -0.56
Tnfsf11O35235 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Tnfsf11O35235 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfsf11O35235 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms