Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm37935-201ENSMUST00000192012 982 ntBASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.91□□□□□ -0.18
Cx3cl1O35188 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.91□□□□□ -0.18
Cx3cl1O35188 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.9□□□□□ -0.18
Cx3cl1O35188 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Gm15427-201ENSMUST00000117288 531 ntBASIC13.9□□□□□ -0.18
Cx3cl1O35188 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.9□□□□□ -0.18
Cx3cl1O35188 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cx3cl1O35188 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cx3cl1O35188 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cx3cl1O35188 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cx3cl1O35188 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.89□□□□□ -0.19
Cx3cl1O35188 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Gm9385-201ENSMUST00000117563 472 ntBASIC13.89□□□□□ -0.19
Cx3cl1O35188 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.89□□□□□ -0.19
Cx3cl1O35188 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.89□□□□□ -0.19
Cx3cl1O35188 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cx3cl1O35188 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.88□□□□□ -0.19
Cx3cl1O35188 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.88□□□□□ -0.19
Cx3cl1O35188 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.88□□□□□ -0.19
Cx3cl1O35188 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cx3cl1O35188 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cx3cl1O35188 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms