Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Gm28305F6U473 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm28305F6U473 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm28305F6U473 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Gm28305F6U473 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm28305F6U473 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.88□□□□□ -0.67
Gm28305F6U473 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Gm28305F6U473 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.88□□□□□ -0.67
Gm28305F6U473 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.88□□□□□ -0.67
Gm28305F6U473 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.88□□□□□ -0.67
Gm28305F6U473 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.88□□□□□ -0.67
Gm28305F6U473 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Gm28305F6U473 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm28305F6U473 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Gm28305F6U473 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Gm28305F6U473 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Gm18421-201ENSMUST00000204122 625 ntBASIC10.86□□□□□ -0.67
Gm28305F6U473 Gm18671-201ENSMUST00000214826 683 ntBASIC10.86□□□□□ -0.67
Gm28305F6U473 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Gm28305F6U473 Gm7367-201ENSMUST00000057611 492 ntBASIC10.86□□□□□ -0.67
Gm28305F6U473 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm28305F6U473 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms