Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube4aE9Q735 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.68■□□□□ 0.42
Ube4aE9Q735 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Gm9229-201ENSMUST00000222777 126 ntBASIC17.68■□□□□ 0.42
Ube4aE9Q735 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.68■□□□□ 0.42
Ube4aE9Q735 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ube4aE9Q735 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Ube4aE9Q735 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Gm11424-201ENSMUST00000121929 829 ntBASIC17.67■□□□□ 0.42
Ube4aE9Q735 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.67■□□□□ 0.42
Ube4aE9Q735 AA619741-201ENSMUST00000195095 646 ntBASIC17.67■□□□□ 0.42
Ube4aE9Q735 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.67■□□□□ 0.42
Ube4aE9Q735 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube4aE9Q735 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Gm10275-202ENSMUST00000168697 495 ntBASIC17.66■□□□□ 0.42
Ube4aE9Q735 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Mir125a-201ENSMUST00000083545 68 ntBASIC17.66■□□□□ 0.42
Ube4aE9Q735 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Gm10275-201ENSMUST00000092620 635 ntBASIC17.66■□□□□ 0.42
Ube4aE9Q735 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.66■□□□□ 0.42
Ube4aE9Q735 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ube4aE9Q735 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4aE9Q735 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms