Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm11524-201ENSMUST00000119349 807 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm4271-201ENSMUST00000174444 973 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm6722-201ENSMUST00000221586 390 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm42941-201ENSMUST00000200347 1321 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm8908-201ENSMUST00000121633 1024 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm23699-201ENSMUST00000158835 135 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm9678-201ENSMUST00000198979 1149 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm3756-201ENSMUST00000169182 1355 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm7541-201ENSMUST00000118361 535 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm13369-201ENSMUST00000119442 987 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm27552-201ENSMUST00000183351 62 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm27844-201ENSMUST00000183613 62 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm28450-201ENSMUST00000187349 638 ntBASIC8.09□□□□□ -1.11
Herc1E9PZP8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC8.09□□□□□ -1.11
Herc1E9PZP8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Herc1E9PZP8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Herc1E9PZP8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Gm18905-201ENSMUST00000205454 928 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 AC164567.1-201ENSMUST00000219185 960 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Gm43094-201ENSMUST00000196549 921 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 Gm44136-201ENSMUST00000203819 1106 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 Gm18615-201ENSMUST00000222919 1031 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 AC154849.4-201ENSMUST00000224868 365 ntBASIC8.08□□□□□ -1.12
Herc1E9PZP8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Herc1E9PZP8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms