Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cntnap3E9PY62 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Gm14723-201ENSMUST00000118686 215 ntBASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cntnap3E9PY62 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gm14722-201ENSMUST00000118943 689 ntBASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gm5354-201ENSMUST00000182417 973 ntBASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gm27631-201ENSMUST00000184163 466 ntBASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cntnap3E9PY62 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Gm27486-201ENSMUST00000184923 80 ntBASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Mir7654-201ENSMUST00000185082 70 ntBASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Cntnap3E9PY62 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms