Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Gm22175-201ENSMUST00000175007 78 ntBASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Gm24158-201ENSMUST00000175263 71 ntBASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh17E9PXF0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh17E9PXF0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh17E9PXF0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.77□□□□□ -0.2
Pcdh17E9PXF0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh17E9PXF0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh17E9PXF0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh17E9PXF0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms