Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Gm14017-201ENSMUST00000121934 386 ntBASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Col6a3E9PWQ3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12616-201ENSMUST00000118594 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm11439-201ENSMUST00000118598 409 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12624-201ENSMUST00000177615 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12621-201ENSMUST00000177760 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12615-201ENSMUST00000177970 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12622-201ENSMUST00000177975 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12627-201ENSMUST00000178412 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12625-201ENSMUST00000179122 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12614-201ENSMUST00000179586 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm12613-201ENSMUST00000180323 382 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Mir6958-201ENSMUST00000184207 73 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a3E9PWQ3 Gm14028-201ENSMUST00000117434 479 ntBASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Gm6023-201ENSMUST00000118217 606 ntBASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Gm9083-201ENSMUST00000120423 819 ntBASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Gm44100-201ENSMUST00000204329 436 ntBASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a3E9PWQ3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms