Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Gm11814-201ENSMUST00000119515 929 ntBASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Gm7561-201ENSMUST00000211203 886 ntBASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hfm1D3Z4R1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Gm7287-201ENSMUST00000205267 602 ntBASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Gm8399-201ENSMUST00000082300 1117 ntBASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Gm29127-201ENSMUST00000188304 517 ntBASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hfm1D3Z4R1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm8775-201ENSMUST00000170943 1327 ntBASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm11839-201ENSMUST00000120647 1953 ntBASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hfm1D3Z4R1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Gm8652-201ENSMUST00000181363 964 ntBASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hfm1D3Z4R1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hfm1D3Z4R1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms